MIABIS on FHIR Implementation Guide
1.0.0 - CI Build

MIABIS on FHIR Implementation Guide - Local Development build (v1.0.0) built by the FHIR (HL7® FHIR® Standard) Build Tools. See the Directory of published versions

ValueSet: DetailedSampleTypeVS

Official URL: https://fhir.bbmri-eric.eu/ValueSet/miabis-detailed-sample-type-vs Version: 1.0.0
Active as of 2025-05-15 Computable Name: DetailedSampleTypeVS

This value set contains codes for the detailed sample type of the sample.

References

Logical Definition (CLD)

Generated Narrative: ValueSet miabis-detailed-sample-type-vs

 

Expansion

ValueSet

Expansion performed internally based on codesystem DetailedSampleType v1.0.0 (CodeSystem)

This value set contains 64 concepts

CodeSystemDisplay (en-US)
  AmnioticFluidhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csAmniotic fluid
  AscitesFluidhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csAscites Fluid
  Bilehttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csBile
  BodyCavityFluidhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csBody cavity fluid
  Bonehttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csBone
  BoneMarrowAspiratehttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csBone marrow aspirate
  BoneMarrowPlasmahttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csBone marrow plasma
  BoneMarrowWholehttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csBone marrow whole
  BreastMilkhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csBreast milk
  BronchLavagehttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csBronchoalveolar lavage
  BuffyCoathttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csBuffy coat
  CancerCellLinehttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csCancer cell lines
  CerebrospinalFluidhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csCerebrospinal fluid
  CordBloodhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csCord blood
  DentalPulphttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csDental pulp
  DNAhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csDNA
  Embryohttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csEmbryo
  EntireOrganhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csEntire body Organ
  Faeceshttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csFaeces
  FetalTissuehttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csFetal tissue
  Fibroblasthttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csFibroblast
  FoodSpecimenhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csFood specimen
  Gashttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csGas exhaled (breath)
  GastricFluidhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csGastric fluid
  Hairhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csHair
  ImmortalizedCellLinehttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csImmortalized cell line
  IsolatedMicrobehttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csIsolated microbes
  IsolatedExosomehttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csIsolated or encriched exosomes
  IsolatedTumorCellhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csIsolated tumor cells(neoplastic cells)
  LiquidBiopsyhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csLiquid biopsy
  MenstrualBloodhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csMenstrual blood
  Nailhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csNail
  NasalWashinghttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csNasal washing
  Organoidhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csOrganoids
  Otherhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csOther
  PericardialFluidhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csPericardial fluid
  PBMChttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csPeripheral blood mononuclear cells
  Placentahttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csPlacenta
  Plasmahttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csPlasma
  PleuralFluidhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csPleural fluid
  PostMortemTissuehttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csPost-mortem tissue
  PrimaryCellshttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csPrimary cells
  Proteinhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csProtein
  RedBloodCellshttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csRed blood cells
  RNAhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csRNA
  Salivahttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csSaliva
  Semenhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csSemen
  Serumhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csSerum
  SpecimenEnvironmenthttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csSpecimen from environment
  Sputumhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csSputum
  StemCellshttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csStem cells and iPS cells
  Swabhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csSwab
  Sweathttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csSweat
  SynovialFluidhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csSynovial fluid
  Tearshttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csTears
  Teethhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csTeeth
  TissueFixedhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csTissue (fixed)
  TissueFreshFrozenhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csTissue (fresh frozen)
  UmbilicalCordhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csUmbilical cord
  Urinehttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csUrine
  UrineSedimenthttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csUrine sediment
  VitreousFluidhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csVitreous fluid
  WholeBloodhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csWhole blood
  WholeBloodDriedhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-detailed-samply-type-csWhole blood dried(eg. Guthrie card)

Explanation of the columns that may appear on this page:

Level A few code lists that FHIR defines are hierarchical - each code is assigned a level. In this scheme, some codes are under other codes, and imply that the code they are under also applies
System The source of the definition of the code (when the value set draws in codes defined elsewhere)
Code The code (used as the code in the resource instance)
Display The display (used in the display element of a Coding). If there is no display, implementers should not simply display the code, but map the concept into their application
Definition An explanation of the meaning of the concept
Comments Additional notes about how to use the code