MIABIS on FHIR Implementation Guide
1.0.0 - CI Build

MIABIS on FHIR Implementation Guide - Local Development build (v1.0.0) built by the FHIR (HL7® FHIR® Standard) Build Tools. See the Directory of published versions

ValueSet: Collection Sample Type Value Set

Official URL: https://fhir.bbmri-eric.eu/ValueSet/miabis-collection-sample-typ-vs Version: 1.0.0
Active as of 2025-05-15 Computable Name: CollectionSampleTypeVS

Value set containing codes for the collection sample types of the provided samples

References

Logical Definition (CLD)

Generated Narrative: ValueSet miabis-collection-sample-typ-vs

 

Expansion

ValueSet

Expansion performed internally based on codesystem MIABIS Collection Sample Type Code System v1.0.0 (CodeSystem)

This value set contains 22 concepts

CodeSystemDisplay (en-US)
  Bloodhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-sample-type-csBlood
  BuffyCoathttps://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-sample-type-csBuffy Coat
  CancerCellLinehttps://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-sample-type-csCancer Cell Lines
  DNAhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-sample-type-csDNA
  EntireOrganhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-sample-type-csEntire Organ
  Faeceshttps://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-sample-type-csFaeces
  EmbryoFetalhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-sample-type-csEmbryo or Fetal tissue
  ImmortalizedCellLinehttps://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-sample-type-csImmortalized Cell Lines
  IsolatedMicrobehttps://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-sample-type-csIsolated Microbes
  OtherBodyFluidhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-sample-type-csOther Body Fluid
  Plasmahttps://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-sample-type-csPlasma
  PrimaryCellshttps://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-sample-type-csPrimary Cells
  PostMortemTissuehttps://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-sample-type-csPost-Mortem Tissue
  RNAhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-sample-type-csRNA
  Salivahttps://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-sample-type-csSaliva
  Serumhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-sample-type-csSerum
  SpecimenEnvironmenthttps://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-sample-type-csSpecimen from Environment or from food
  Swabhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-sample-type-csSwab
  TissueFrozenhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-sample-type-csTissue (frozen)
  TissueFFPEhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-sample-type-csTissue (FFPE)
  Urinehttps://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-sample-type-csUrine
  Otherhttps://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-sample-type-csOther

Explanation of the columns that may appear on this page:

Level A few code lists that FHIR defines are hierarchical - each code is assigned a level. In this scheme, some codes are under other codes, and imply that the code they are under also applies
System The source of the definition of the code (when the value set draws in codes defined elsewhere)
Code The code (used as the code in the resource instance)
Display The display (used in the display element of a Coding). If there is no display, implementers should not simply display the code, but map the concept into their application
Definition An explanation of the meaning of the concept
Comments Additional notes about how to use the code