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: MIABIS Collection Sample Type Code System - XML Representation

Active as of 2025-05-15

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<CodeSystem xmlns="http://hl7.org/fhir">
  <id value="miabis-collection-sample-type-cs"/>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><p class="res-header-id"><b>Generated Narrative: CodeSystem miabis-collection-sample-type-cs</b></p><a name="miabis-collection-sample-type-cs"> </a><a name="hcmiabis-collection-sample-type-cs"> </a><a name="miabis-collection-sample-type-cs-en-US"> </a><p>This  code system <code>https://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-sample-type-cs</code> defines the following codes:</p><table class="codes"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td></tr><tr><td style="white-space:nowrap">Blood<a name="miabis-collection-sample-type-cs-Blood"> </a></td><td>Blood</td></tr><tr><td style="white-space:nowrap">BuffyCoat<a name="miabis-collection-sample-type-cs-BuffyCoat"> </a></td><td>Buffy Coat</td></tr><tr><td style="white-space:nowrap">CancerCellLine<a name="miabis-collection-sample-type-cs-CancerCellLine"> </a></td><td>Cancer Cell Lines</td></tr><tr><td style="white-space:nowrap">DNA<a name="miabis-collection-sample-type-cs-DNA"> </a></td><td>DNA</td></tr><tr><td style="white-space:nowrap">EntireOrgan<a name="miabis-collection-sample-type-cs-EntireOrgan"> </a></td><td>Entire Organ</td></tr><tr><td style="white-space:nowrap">Faeces<a name="miabis-collection-sample-type-cs-Faeces"> </a></td><td>Faeces</td></tr><tr><td style="white-space:nowrap">EmbryoFetal<a name="miabis-collection-sample-type-cs-EmbryoFetal"> </a></td><td>Embryo or Fetal tissue</td></tr><tr><td style="white-space:nowrap">ImmortalizedCellLine<a name="miabis-collection-sample-type-cs-ImmortalizedCellLine"> </a></td><td>Immortalized Cell Lines</td></tr><tr><td style="white-space:nowrap">IsolatedMicrobe<a name="miabis-collection-sample-type-cs-IsolatedMicrobe"> </a></td><td>Isolated Microbes</td></tr><tr><td style="white-space:nowrap">OtherBodyFluid<a name="miabis-collection-sample-type-cs-OtherBodyFluid"> </a></td><td>Other Body Fluid</td></tr><tr><td style="white-space:nowrap">Plasma<a name="miabis-collection-sample-type-cs-Plasma"> </a></td><td>Plasma</td></tr><tr><td style="white-space:nowrap">PrimaryCells<a name="miabis-collection-sample-type-cs-PrimaryCells"> </a></td><td>Primary Cells</td></tr><tr><td style="white-space:nowrap">PostMortemTissue<a name="miabis-collection-sample-type-cs-PostMortemTissue"> </a></td><td>Post-Mortem Tissue</td></tr><tr><td style="white-space:nowrap">RNA<a name="miabis-collection-sample-type-cs-RNA"> </a></td><td>RNA</td></tr><tr><td style="white-space:nowrap">Saliva<a name="miabis-collection-sample-type-cs-Saliva"> </a></td><td>Saliva</td></tr><tr><td style="white-space:nowrap">Serum<a name="miabis-collection-sample-type-cs-Serum"> </a></td><td>Serum</td></tr><tr><td style="white-space:nowrap">SpecimenEnvironment<a name="miabis-collection-sample-type-cs-SpecimenEnvironment"> </a></td><td>Specimen from Environment or from food</td></tr><tr><td style="white-space:nowrap">Swab<a name="miabis-collection-sample-type-cs-Swab"> </a></td><td>Swab</td></tr><tr><td style="white-space:nowrap">TissueFrozen<a name="miabis-collection-sample-type-cs-TissueFrozen"> </a></td><td>Tissue (frozen)</td></tr><tr><td style="white-space:nowrap">TissueFFPE<a name="miabis-collection-sample-type-cs-TissueFFPE"> </a></td><td>Tissue (FFPE)</td></tr><tr><td style="white-space:nowrap">Urine<a name="miabis-collection-sample-type-cs-Urine"> </a></td><td>Urine</td></tr><tr><td style="white-space:nowrap">Other<a name="miabis-collection-sample-type-cs-Other"> </a></td><td>Other</td></tr></table></div>
  </text>
  <url
       value="https://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-sample-type-cs"/>
  <version value="1.0.0"/>
  <name value="CollectionSampleTypeCS"/>
  <title value="MIABIS Collection Sample Type Code System"/>
  <status value="active"/>
  <date value="2025-05-15T13:14:34+00:00"/>
  <publisher value="BBMRI-ERIC"/>
  <contact>
    <name value="BBMRI-ERIC"/>
    <telecom>
      <system value="url"/>
      <value value="http://bbmri-eric.eu"/>
    </telecom>
    <telecom>
      <system value="email"/>
      <value value="contact@bbmri-eric.eu"/>
    </telecom>
  </contact>
  <contact>
    <name value="Radovan Tomasik"/>
    <telecom>
      <system value="email"/>
      <value value="radovan.tomasik@bbmri-eric.eu"/>
      <use value="work"/>
    </telecom>
  </contact>
  <description
               value="Codes for the collection sample types of the provided samples"/>
  <content value="complete"/>
  <count value="22"/>
  <concept>
    <code value="Blood"/>
    <display value="Blood"/>
  </concept>
  <concept>
    <code value="BuffyCoat"/>
    <display value="Buffy Coat"/>
  </concept>
  <concept>
    <code value="CancerCellLine"/>
    <display value="Cancer Cell Lines"/>
  </concept>
  <concept>
    <code value="DNA"/>
    <display value="DNA"/>
  </concept>
  <concept>
    <code value="EntireOrgan"/>
    <display value="Entire Organ"/>
  </concept>
  <concept>
    <code value="Faeces"/>
    <display value="Faeces"/>
  </concept>
  <concept>
    <code value="EmbryoFetal"/>
    <display value="Embryo or Fetal tissue"/>
  </concept>
  <concept>
    <code value="ImmortalizedCellLine"/>
    <display value="Immortalized Cell Lines"/>
  </concept>
  <concept>
    <code value="IsolatedMicrobe"/>
    <display value="Isolated Microbes"/>
  </concept>
  <concept>
    <code value="OtherBodyFluid"/>
    <display value="Other Body Fluid"/>
  </concept>
  <concept>
    <code value="Plasma"/>
    <display value="Plasma"/>
  </concept>
  <concept>
    <code value="PrimaryCells"/>
    <display value="Primary Cells"/>
  </concept>
  <concept>
    <code value="PostMortemTissue"/>
    <display value="Post-Mortem Tissue"/>
  </concept>
  <concept>
    <code value="RNA"/>
    <display value="RNA"/>
  </concept>
  <concept>
    <code value="Saliva"/>
    <display value="Saliva"/>
  </concept>
  <concept>
    <code value="Serum"/>
    <display value="Serum"/>
  </concept>
  <concept>
    <code value="SpecimenEnvironment"/>
    <display value="Specimen from Environment or from food"/>
  </concept>
  <concept>
    <code value="Swab"/>
    <display value="Swab"/>
  </concept>
  <concept>
    <code value="TissueFrozen"/>
    <display value="Tissue (frozen)"/>
  </concept>
  <concept>
    <code value="TissueFFPE"/>
    <display value="Tissue (FFPE)"/>
  </concept>
  <concept>
    <code value="Urine"/>
    <display value="Urine"/>
  </concept>
  <concept>
    <code value="Other"/>
    <display value="Other"/>
  </concept>
</CodeSystem>