MIABIS on FHIR Implementation Guide
1.0.0 - CI Build

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: CollectionOrgInstance - JSON Representation

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{
  "resourceType" : "Organization",
  "id" : "example-collection",
  "meta" : {
    "profile" : [
      🔗 "https://fhir.bbmri-eric.eu/StructureDefinition/miabis-collection-organization"
    ]
  },
  "text" : {
    "status" : "extensions",
    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p class=\"res-header-id\"><b>Generated Narrative: Organization example-collection</b></p><a name=\"example-collection\"> </a><a name=\"hcexample-collection\"> </a><a name=\"example-collection-en-US\"> </a><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\"/><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-miabis-collection-organization.html\">Collection Organization</a></p></div><p><b>Collection Dataset Type Extension</b>: <span title=\"Codes:{https://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-dataset-typeCS Genomic}\">Genomic dataset</span></p><p><b>Sample Source Extension</b>: <span title=\"Codes:{https://fhir.bbmri-eric.eu/CodeSystem/miabis-sample-source-cs Human}\">Human</span></p><p><b>Sample Collection Setting Extension</b>: <span title=\"Codes:{https://fhir.bbmri-eric.eu/CodeSystem/miabis-sample-collection-setting-cs RoutineHealthCare}\">Routine health care setting</span></p><p><b>Collection Design Extension</b>: <span title=\"Codes:{https://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-design-cs CaseControl}\">Case-control</span></p><p><b>Use and Access Conditions Extension</b>: <span title=\"Codes:{https://fhir.bbmri-eric.eu/CodeSystem/miabis-use-and-access-conditions-cs CommercialUse}\">Commercial use</span></p><p><b>Publications Extension</b>: publicationExample</p><p><b>Description extension</b>: descriptionExample</p><p><b>identifier</b>: collectionOrgId</p><p><b>name</b>: collectionOrgName</p><p><b>alias</b>: collectionOrgAlias</p><p><b>telecom</b>: <a href=\"http://collectionOrg.com\">http://collectionOrg.com</a></p><p><b>address</b>: CZ </p><p><b>partOf</b>: <a href=\"Organization-example-biobank.html\">Organization biobankName</a></p><h3>Contacts</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Name</b></td><td><b>Telecom</b></td></tr><tr><td style=\"display: none\">*</td><td>contactName contactFamilyName </td><td><a href=\"mailto:contactEmail\">contactEmail</a></td></tr></table></div>"
  },
  "extension" : [
    {
      "url" : "https://fhir.bbmri-eric.eu/StructureDefinition/miabis-collection-dataset-type-extension",
      "valueCodeableConcept" : {
        "coding" : [
          {
            "system" : "https://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-dataset-typeCS",
            "code" : "Genomic"
          }
        ]
      }
    },
    {
      "url" : "https://fhir.bbmri-eric.eu/StructureDefinition/miabis-sample-source-extension",
      "valueCodeableConcept" : {
        "coding" : [
          {
            "system" : "https://fhir.bbmri-eric.eu/CodeSystem/miabis-sample-source-cs",
            "code" : "Human"
          }
        ]
      }
    },
    {
      "url" : "https://fhir.bbmri-eric.eu/StructureDefinition/miabis-sample-collection-setting-extension",
      "valueCodeableConcept" : {
        "coding" : [
          {
            "system" : "https://fhir.bbmri-eric.eu/CodeSystem/miabis-sample-collection-setting-cs",
            "code" : "RoutineHealthCare"
          }
        ]
      }
    },
    {
      "url" : "https://fhir.bbmri-eric.eu/StructureDefinition/miabis-collection-design-extension",
      "valueCodeableConcept" : {
        "coding" : [
          {
            "system" : "https://fhir.bbmri-eric.eu/CodeSystem/miabis-collection-design-cs",
            "code" : "CaseControl"
          }
        ]
      }
    },
    {
      "url" : "https://fhir.bbmri-eric.eu/StructureDefinition/miabis-use-and-access-conditions-extension",
      "valueCodeableConcept" : {
        "coding" : [
          {
            "system" : "https://fhir.bbmri-eric.eu/CodeSystem/miabis-use-and-access-conditions-cs",
            "code" : "CommercialUse"
          }
        ]
      }
    },
    {
      "url" : "https://fhir.bbmri-eric.eu/StructureDefinition/miabis-publications-extension",
      "valueString" : "publicationExample"
    },
    {
      "url" : "https://fhir.bbmri-eric.eu/StructureDefinition/miabis-organization-description-extension",
      "valueString" : "descriptionExample"
    }
  ],
  "identifier" : [
    {
      "value" : "collectionOrgId"
    }
  ],
  "name" : "collectionOrgName",
  "alias" : [
    "collectionOrgAlias"
  ],
  "telecom" : [
    {
      "system" : "url",
      "value" : "http://collectionOrg.com"
    }
  ],
  "address" : [
    {
      "country" : "CZ"
    }
  ],
  "partOf" : {
    🔗 "reference" : "Organization/example-biobank"
  },
  "contact" : [
    {
      "name" : {
        "family" : "contactFamilyName",
        "given" : [
          "contactName"
        ]
      },
      "telecom" : [
        {
          "system" : "email",
          "value" : "contactEmail"
        }
      ]
    }
  ]
}